Presentation | 2014-01-21 Visualization and Discrimination of DNA sequences using Self-Organizing Maps Yutaro Kaneko, Hirosi Dozono, |
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Abstract(in Japanese) | (See Japanese page) |
Abstract(in English) | Recently, the next generation sequencers produce the large amount of sequence information of DNA. Thus, it becomes problem to extract the relevant information from whole information. In this study, it is intended to efficiently extract a variety of information hidden in DNA sequence using Self Organizing Maps, which can visualize the multi-dimensional data on the two dimensional plane. The experiments of classification for the DNA sequence of some species and some metabolic functions are conducted, and propose the method examine its performance. |
Keyword(in Japanese) | (See Japanese page) |
Keyword(in English) | Self Organizing Map(SOM) / next generation sequencing |
Paper # | NC2013-79 |
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Committee | NC |
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Conference Date | 2014/1/13(1days) |
Place (in Japanese) | (See Japanese page) |
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Topics (in Japanese) | (See Japanese page) |
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Registration To | Neurocomputing (NC) |
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Language | JPN |
Title (in Japanese) | (See Japanese page) |
Sub Title (in Japanese) | (See Japanese page) |
Title (in English) | Visualization and Discrimination of DNA sequences using Self-Organizing Maps |
Sub Title (in English) | |
Keyword(1) | Self Organizing Map(SOM) |
Keyword(2) | next generation sequencing |
1st Author's Name | Yutaro Kaneko |
1st Author's Affiliation | Graduate School of Science and Engineering, Saga University() |
2nd Author's Name | Hirosi Dozono |
2nd Author's Affiliation | Graduate School of Science and Engineering, Saga University |
Date | 2014-01-21 |
Paper # | NC2013-79 |
Volume (vol) | vol.113 |
Number (no) | 382 |
Page | pp.pp.- |
#Pages | 5 |
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