Presentation 2012-06-28
Multilevel modeling of physiological systems and nervous systems using PhysioDesigner
Yoshiyuki ASAI, Hiroaki KITANO,
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Abstract(in English) As new interdisciplinary scientific research fields such as integrated life science is advancing, the importance of mathematical modelings and simulations of multilevel physiological systems are increasing. This article introduces a software application PhysioDesigner and model description language PHML which have been developed for supporting such modeling and simulations. PhysioDesigner provides graphical user interface to build models of physiological functions. Those models created on PhysioDesigner were written in PHML format, which is a specification of XML. Simulations on the models can be done with Flint application which has been developed concurrently with PhysioDesigner. Flint can perform a parallel computing for big simulations. In Physiome.jp, there is a model database of ISML which is XML based modeling language perfectly compatible with PHML.
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Keyword(in English) Multilevel modeling / Systems biology / Parallel computing / Integrated physiology
Paper # NC2012-12
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Committee NC
Conference Date 2012/6/21(1days)
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Registration To Neurocomputing (NC)
Language JPN
Title (in Japanese) (See Japanese page)
Sub Title (in Japanese) (See Japanese page)
Title (in English) Multilevel modeling of physiological systems and nervous systems using PhysioDesigner
Sub Title (in English)
Keyword(1) Multilevel modeling
Keyword(2) Systems biology
Keyword(3) Parallel computing
Keyword(4) Integrated physiology
1st Author's Name Yoshiyuki ASAI
1st Author's Affiliation Okinawa Institute of Science and Technology Graduate University()
2nd Author's Name Hiroaki KITANO
2nd Author's Affiliation Okinawa Institute of Science and Technology Graduate University:the Systems Biology Institute
Date 2012-06-28
Paper # NC2012-12
Volume (vol) vol.112
Number (no) 108
Page pp.pp.-
#Pages 3
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