| Presentation | 2005-09-15 Building of the SBML System for an FPGA-based Biochemical Simulator Yow Iwaoka, Yasunori Osana, Masato Yoshimi, Toshinori Kojima, Yuri Nishikawa, Akira Hunahashi, Noriko Hiroi, Yuichiro Shibata, Naoki Iwanaga, Hiroaki Kitano, Hideharu Amano, |
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| PDF Download Page |  PDF download Page Link |
| Abstract(in Japanese) | (See Japanese page) |
| Abstract(in English) | Today, there are many simulators which simulates biochemical reactions. And an FPGA based simulator was developed because a large scale simulation brings compute time growth. However, it carrys out only accelerating, and does not pay attention to usability. In this research report, interface software which accepts SBML models is implemented, and this overhead is evaluated. |
| Keyword(in Japanese) | (See Japanese page) |
| Keyword(in English) | SBML / FPGA / Biochemical Simulation / ReCSiP |
| Paper # | RECONF2005-40 |
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| Conference Information | |
| Committee | RECONF |
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| Conference Date | 2005/9/8(1days) |
| Place (in Japanese) | (See Japanese page) |
| Place (in English) | |
| Topics (in Japanese) | (See Japanese page) |
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| Vice Chair | |
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| Paper Information | |
| Registration To | Reconfigurable Systems (RECONF) |
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| Language | JPN |
| Title (in Japanese) | (See Japanese page) |
| Sub Title (in Japanese) | (See Japanese page) |
| Title (in English) | Building of the SBML System for an FPGA-based Biochemical Simulator |
| Sub Title (in English) | |
| Keyword(1) | SBML |
| Keyword(2) | FPGA |
| Keyword(3) | Biochemical Simulation |
| Keyword(4) | ReCSiP |
| 1st Author's Name | Yow Iwaoka |
| 1st Author's Affiliation | Graduate School of Science and Technology, Keio University() |
| 2nd Author's Name | Yasunori Osana |
| 2nd Author's Affiliation | Graduate School of Science and Technology, Keio University |
| 3rd Author's Name | Masato Yoshimi |
| 3rd Author's Affiliation | Graduate School of Science and Technology, Keio University |
| 4th Author's Name | Toshinori Kojima |
| 4th Author's Affiliation | Faculty of Science and Technology, Keio University |
| 5th Author's Name | Yuri Nishikawa |
| 5th Author's Affiliation | Faculty of Science and Technology, Keio University |
| 6th Author's Name | Akira Hunahashi |
| 6th Author's Affiliation | Kitano Symbiotic Systems Project, ERATO-SORST, Japan Science and Technology Agency |
| 7th Author's Name | Noriko Hiroi |
| 7th Author's Affiliation | Kitano Symbiotic Systems Project, ERATO-SORST, Japan Science and Technology Agency |
| 8th Author's Name | Yuichiro Shibata |
| 8th Author's Affiliation | Dept. of Computer and Information Sciences, Nagasaki University |
| 9th Author's Name | Naoki Iwanaga |
| 9th Author's Affiliation | Dept. of Computer and Information Sciences, Nagasaki University |
| 10th Author's Name | Hiroaki Kitano |
| 10th Author's Affiliation | Kitano Symbiotic Systems Project, ERATO-SORST, Japan Science and Technology Agency |
| 11th Author's Name | Hideharu Amano |
| 11th Author's Affiliation | Faculty of Science and Technology, Keio University |
| Date | 2005-09-15 |
| Paper # | RECONF2005-40 |
| Volume (vol) | vol.105 |
| Number (no) | 287 |
| Page | pp.pp.- |
| #Pages | 6 |
| Date of Issue | |