Presentation 2005-04-18
On the Complexity of Inferring a Graph from Path Frequency
Tatsuya AKUTSU, Daiji FUKAGAWA,
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Abstract(in English) We consider the problem of inferring a graph (and a sequence) from the numbers of occurrences of vertex-labeled paths, which is closely related to the pre-image problem for graphs in machine learning : to reconstruct a graph from its feature space representation. We show that this problem can be solved in polynomial time of the size of an output graph if graphs are trees of bounded degree and the lengths of given paths are bounded by a constant. On the other hand, we show that this problem is strongly NP-complete even for planer graphs of bounded degree.
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Keyword(in English) graph inference / path frequency / pre-image / strongly NP-complete
Paper # COMP2005-7
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Conference Information
Committee COMP
Conference Date 2005/4/11(1days)
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Registration To Theoretical Foundations of Computing (COMP)
Language ENG
Title (in Japanese) (See Japanese page)
Sub Title (in Japanese) (See Japanese page)
Title (in English) On the Complexity of Inferring a Graph from Path Frequency
Sub Title (in English)
Keyword(1) graph inference
Keyword(2) path frequency
Keyword(3) pre-image
Keyword(4) strongly NP-complete
1st Author's Name Tatsuya AKUTSU
1st Author's Affiliation Bioinformatics Center, Institute for Chemical Research, Kyoto University()
2nd Author's Name Daiji FUKAGAWA
2nd Author's Affiliation Graduate School of Informatics, Kyoto University
Date 2005-04-18
Paper # COMP2005-7
Volume (vol) vol.105
Number (no) 7
Page pp.pp.-
#Pages 7
Date of Issue