Presentation 2004/11/27
Developing Text Mining Based Algorithms for Classifying Biological Sequences(Text Mining I)(Joint Workshop of Vietnamese Society of AI, SIGKBS-JSAI, ICS-IPSJ, and IEICE-SIGAI on Active Mining)
HOANG KIEM, DO PHUC,
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Abstract(in English) The paper focuses on developing the algorithms for discovering the frequent motifs and the ordered co-occurrence set of frequent motifs supporting, the classification of the family of biological sequences. AprioriBioSequence is the name of our proposed. Algorithm, which has been developed from the algorithms of discovering the frequent patterns in document sentences of text mining. AprioriBioSequence can discover the frequent motifs without specifying the length of discovered motifs. Besides, paper also deals with the algorithm for discovering the ordered set of the co-occurrence frequent motifs for classifying the biological sequences. The experimental results of the proposed algorithms with the E-Coli Promoter sequences are presented.
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Keyword(in English) biological sequences / co-occurrence / frequent motifs / text mining
Paper # AI2004-21
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Committee AI
Conference Date 2004/11/27(1days)
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Language ENG
Title (in Japanese) (See Japanese page)
Sub Title (in Japanese) (See Japanese page)
Title (in English) Developing Text Mining Based Algorithms for Classifying Biological Sequences(Text Mining I)(Joint Workshop of Vietnamese Society of AI, SIGKBS-JSAI, ICS-IPSJ, and IEICE-SIGAI on Active Mining)
Sub Title (in English)
Keyword(1) biological sequences
Keyword(2) co-occurrence
Keyword(3) frequent motifs
Keyword(4) text mining
1st Author's Name HOANG KIEM
1st Author's Affiliation Center for Information Technology Vietnam National University, HCM city()
2nd Author's Name DO PHUC
2nd Author's Affiliation Center for Information Technology Vietnam National University, HCM city
Date 2004/11/27
Paper # AI2004-21
Volume (vol) vol.104
Number (no) 485
Page pp.pp.-
#Pages 6
Date of Issue