| Presentation | 2019-06-18 A sleep state analysis from calcium imaging data using non-negative matrix factorization Mizuo Nagayama, Toshimitsu Aritake, Hideitsu Hino, Takeshi Kanda, Takehiro Miyazaki, Masashi Yanagisawa, Shotaro Akaho, Noboru Murata, |
|---|---|
| PDF Download Page |  PDF download Page Link |
| Abstract(in Japanese) | (See Japanese page) |
| Abstract(in English) | Sleep is an essential process for the survival of animals, however, its phenomenon is poorly understood. We aim to discover phenomena which characterize sleep/wake states from calcium imaging data. Calcium imaging is a technique that can observe activities of a large number of neurons simultaneously, however, it has a disadvantage of low time resolution. Therefore, we do not inference on neuronal activity at a single spike level. In this paper, we made an assumption that groups of neurons become active simultaneously. We used non-negative matrix factorization (NMF) to identify those groups and their neuronal activities in time. As a result, a neuronal group that become active in NREM sleep was estimated. |
| Keyword(in Japanese) | (See Japanese page) |
| Keyword(in English) | Sleep / Calcium Imaging / Non-negative Matrix Factorization |
| Paper # | NC2019-14,IBISML2019-12 |
| Date of Issue | 2019-06-10 (NC, IBISML) |
| Conference Information | |
| Committee | NC / IBISML / IPSJ-MPS / IPSJ-BIO |
|---|---|
| Conference Date | 2019/6/17(3days) |
| Place (in Japanese) | (See Japanese page) |
| Place (in English) | Okinawa Institute of Science and Technology |
| Topics (in Japanese) | (See Japanese page) |
| Topics (in English) | Neurocomputing, Machine Learning Approach to Biodata Mining, and General |
| Chair | Hayaru Shouno(UEC) / Hisashi Kashima(Kyoto Univ.) / Masakazu Sekijima(Tokyo Tech) / Hiroyuki Kurata(Kyutech) |
| Vice Chair | Kazuyuki Samejima(Tamagawa Univ) / Masashi Sugiyama(Univ. of Tokyo) / Koji Tsuda(Univ. of Tokyo) |
| Secretary | Kazuyuki Samejima(NAIST) / Masashi Sugiyama(NTT) / Koji Tsuda(Nagoya Inst. of Tech.) / (AIST) / (Nagoya Univ.) |
| Assistant | Takashi Shinozaki(NICT) / Ken Takiyama(TUAT) / Tomoharu Iwata(NTT) / Shigeyuki Oba(Kyoto Univ.) |
| Paper Information | |
| Registration To | Technical Committee on Neurocomputing / Technical Committee on Infomation-Based Induction Sciences and Machine Learning / IPSJ Special Interest Group on Mathematical Modeling and Problem Solving / IPSJ Special Interest Group on Bioinformatics and Genomics |
|---|---|
| Language | JPN |
| Title (in Japanese) | (See Japanese page) |
| Sub Title (in Japanese) | (See Japanese page) |
| Title (in English) | A sleep state analysis from calcium imaging data using non-negative matrix factorization |
| Sub Title (in English) | |
| Keyword(1) | Sleep |
| Keyword(2) | Calcium Imaging |
| Keyword(3) | Non-negative Matrix Factorization |
| 1st Author's Name | Mizuo Nagayama |
| 1st Author's Affiliation | Waseda University(Waseda Univ.) |
| 2nd Author's Name | Toshimitsu Aritake |
| 2nd Author's Affiliation | Waseda University(Waseda Univ.) |
| 3rd Author's Name | Hideitsu Hino |
| 3rd Author's Affiliation | The Institute of Statistical Mathematics(ISM) |
| 4th Author's Name | Takeshi Kanda |
| 4th Author's Affiliation | University of Tsukuba(Univ. of Tsukuba) |
| 5th Author's Name | Takehiro Miyazaki |
| 5th Author's Affiliation | University of Tsukuba(Univ. of Tsukuba) |
| 6th Author's Name | Masashi Yanagisawa |
| 6th Author's Affiliation | University of Tsukuba(Univ. of Tsukuba) |
| 7th Author's Name | Shotaro Akaho |
| 7th Author's Affiliation | National Institute of Advanced Industrial Science and Technology(AIST) |
| 8th Author's Name | Noboru Murata |
| 8th Author's Affiliation | Waseda University(Waseda Univ.) |
| Date | 2019-06-18 |
| Paper # | NC2019-14,IBISML2019-12 |
| Volume (vol) | vol.119 |
| Number (no) | NC-88,IBISML-89 |
| Page | pp.pp.57-61(NC), pp.79-83(IBISML), |
| #Pages | 5 |
| Date of Issue | 2019-06-10 (NC, IBISML) |