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All Technical Committee Conferences (Searched in: All Years)
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| Search Results: Conference Papers |
| Conference Papers (Available on Advance Programs) (Sort by: Date Descending) |
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| Committee |
Date Time |
Place |
Paper Title / Authors |
Abstract |
Paper # |
| RECONF |
2008-05-23
14:25 |
Fukushima |
The University of Aizu |
Pipeline Scheduling with Input Port Constraints for an FPGA-based Biochemical Simulator
Tomoya Ishimori, Hideki Yamada, Yuichiro Shibata (Nagasaki Univ.), Yasunori Osana, Masato Yoshimi, Yuri Nishikawa, Toshinori Kojima, Hideharu Amano, Akira Funahashi (Keio Univ.), Noriko Hiroi (EMPL-EBI), Kiyoshi Oguri (Nagasaki Univ.)  RECONF2008-20 |
[more] |
RECONF2008-20
pp.113-118 |
VLD, CPSY, RECONF, DC, IPSJ-SLDM, IPSJ-ARC
(Joint) [detail] |
2007-11-22
13:25 |
Fukuoka |
Kitakyushu International Conference Center |
Evaluation of a Data-Driven Architecture for a Stochastic Biochemical Simulator on an FPGA
Masato Yoshimi, Yuri Nishikawa, Toshinori Kojima, Yasunori Osana, Akira Funahashi (Keio Univ.), Noriko Hiroi (EMBL-EBI), Yuichiro Shibata, Hideki Yamada (Nagasaki Univ.), Hiroaki Kitano (JST), Hideharu Amano (Keio Univ.) RECONF2007-50 |
This paper studies several designs of network-based FPGA implementation of a stochastic simulation algorithm called the ... [more] |
RECONF2007-50
pp.43-48 |
| RECONF |
2007-09-21
14:00 |
Shiga |
Ritsumeikan Univ. Biwako Kusatsu Campus (Shiga) |
Proposal and Evaluation of the Network-based Stochastic Biochemical Simulator on an FPGA
Masato Yoshimi, Yuri Nishikawa, Toshinori Kojima, Yasunori Osana, Akira Funahashi (Keio Univ.), Noriko Hiroi (EMBL-EBI), Yuichiro Shibata, Hideki Yamada (Nagasaki Univ.), Hiroaki Kitano (JST), Hideharu Amano (Keio Univ.) |
(Advance abstract in Japanese is available) [more] |
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| RECONF |
2007-05-17
14:00 |
Ishikawa |
Kanazawa Bunka Hall |
Autometic combining of rate law functions for an FPGA-based biochemical simulator ReCSiP
Hideki Yamada, Naoki Iwanaga, Yuichiro Shibata (Nagasaki Univ.), Yasunori Osana, Masato Yoshimi, Yow Iwaoka, Yuri Nishikawa, Toshinori Kojima, Hideharu Amano, Akira Funahashi (Keio Univ.), Noriko Hiroi (EMBL-EBI), Hiroaki Kitano (JST), Kiyoshi Oguri (Nagasaki Univ.) RECONF2007-3 |
In order to simulate large scale biological models with a reconfigurable FPGA-based biochemical simulator system, reduct... [more] |
RECONF2007-3
pp.13-18 |
| RECONF |
2006-05-18
17:30 |
Miyagi |
TOHOKU UNIVERSITY |
Implementation and Evaluation of General-Purpose Host Interface on ReCSiP Board
Toshinori Kojima, Yasunori Osana, Masato Yoshimi, Yow Iwaoka, Yuri Nishikawa (Keio Univ.), Akira Funahashi, Noriko Hiroi (JST), Yuichiro Shibata, Naoki Iwanaga (Nagasaki Univ.), Hiroaki Kitano (JST), Hideharu Amano (Keio Univ.) |
[more] |
RECONF2006-10
pp.55-60 |
| RECONF, CPSY, VLD, IPSJ-SLDM |
2006-01-18
14:55 |
Kanagawa |
|
A Stochastic Biochemical Simulator with a Data-transfer Network on an FPGA
Masato Yoshimi, Yasunori Osana, Yow Iwaoka, Yuri Nishikawa, Toshinori Kojima (Keio Univ.), Akira Funahashi, Noriko Hiroi (JST), Yuichiro Shibata, Naoki Iwanaga (Nagasaki Univ.), Hiroaki Kitano (JST), Hideharu Amano (Keio Univ.) |
A high-perfomance biochemical simulatior using a reconfigurable system draws attention as a low-cost solution from biolo... [more] |
VLD2005-105 CPSY2005-61 RECONF2005-94
pp.47-52 |
| RECONF, CPSY, VLD, IPSJ-SLDM |
2006-01-18
15:20 |
Kanagawa |
|
A Performance Improvement Strategy for Numerical Integration on an FPGA-Based Biochemical Simulator ReCSiP
Yuri Nishikawa, Yasunori Osana, Masato Yoshimi, Yow Iwaoka, Toshinori Kojima (Keio Univ.), Akira Funahashi, Noriko Hiroi (JST), Yuichiro Shibata, Naoki Iwanaga (Nagasaki Univ.), Hiroaki Kitano (JST), Hideharu Amano (Keio Univ.) |
Computational simulation is a highly effective solution for cellular analyses in recent bioinformatics. As the scale of... [more] |
VLD2005-106 CPSY2005-62 RECONF2005-95
pp.53-58 |
| RECONF, CPSY, VLD, IPSJ-SLDM |
2006-01-18
15:45 |
Kanagawa |
|
Hardware-resource Utilization Analysis on an FPGA-Based Biochemical Simulator ReCSiP
Yasunori Osana (Keio Univ.), Naoki Iwanaga (Nagasaki Univ.), Masato Yoshimi, Yow Iwaoka, Toshinori Kojima, Yuri Nishikawa (Keio Univ.), Akira Funahashi (JST), Noriko Hiroi (Keio Univ.), Yuichiro Shibata, Hiroaki Kitano (Nagasaki Univ.), Hideharu Amano (Keio Univ.) |
(Advance abstract in Japanese is available) [more] |
VLD2005-107 CPSY2005-63 RECONF2005-96
pp.59-64 |
| RECONF |
2005-09-15
16:15 |
Hiroshima |
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Control Mechanism of the FPGA-Based Biochemical Simulator ReCSiP
Yasunori Osana, Masato Yoshimi, Yow Iwaoka, Toshinori Kojima, Yuri Nishikawa (Keio Univ.), Akira Funahashi, Noriko Hiroi (JST), Yuichiro Shibata, Naoki Iwanaga (Nagasaki Univ.), Hiroaki Kitano (JST), Hideharu Amano (Keio Univ.) |
[more] |
RECONF2005-39
pp.55-60 |
| RECONF |
2005-09-15
16:45 |
Hiroshima |
|
Building of the SBML System for an FPGA-based Biochemical Simulator
Yow Iwaoka, Yasunori Osana, Masato Yoshimi, Toshinori Kojima, Yuri Nishikawa (Keio Univ.), Akira Funahashi, Noriko Hiroi (JST), Yuichiro Shibata, Naoki Iwanaga (Nagasaki Univ.), Hiroaki Kitano (JST), Hideharu Amano (Keio Univ.) |
Today, there are many simulators which simulates biochemical
reactions. And an FPGA based simulator was developed becau... [more] |
RECONF2005-40
pp.61-66 |
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