Paper Abstract and Keywords |
Presentation |
2006-01-12 10:00
Generation of Character-base Model by Genetic Programming to Identify Exon-Intron Boundaries Yuji Fujita, Kunihito Yamamori, Ikuo Yoshihara, Masaru Aikawa (Univ. of Miyazaki) |
Abstract |
(in Japanese) |
(See Japanese page) |
(in English) |
Genetic Programming (GP) is one of a method to identify exon-intron boundaries in gene sequences. In conventional method, bases are represented by 2- or 4-bits length binary codes and these bits are independently used as inputs to the identification model.
However, the identification model is not directly reflect bases.
Here we report a method to generate exon-intron boundaries identify model by GP which can directly use bases as inputs. |
Keyword |
(in Japanese) |
(See Japanese page) |
(in English) |
Exon / Intron / DNA sequence / Genetic Programming / / / / |
Reference Info. |
IEICE Tech. Rep., vol. 105, no. 503, CAS2005-75, pp. 1-6, Jan. 2006. |
Paper # |
CAS2005-75 |
Date of Issue |
2006-01-05 (CAS) |
ISSN |
Print edition: ISSN 0913-5685 |
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Conference Information |
Committee |
CAS |
Conference Date |
2006-01-11 - 2006-01-13 |
Place (in Japanese) |
(See Japanese page) |
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Paper Information |
Registration To |
CAS |
Conference Code |
2006-01-CAS |
Language |
Japanese |
Title (in Japanese) |
(See Japanese page) |
Sub Title (in Japanese) |
(See Japanese page) |
Title (in English) |
Generation of Character-base Model by Genetic Programming to Identify Exon-Intron Boundaries |
Sub Title (in English) |
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Keyword(1) |
Exon |
Keyword(2) |
Intron |
Keyword(3) |
DNA sequence |
Keyword(4) |
Genetic Programming |
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1st Author's Name |
Yuji Fujita |
1st Author's Affiliation |
University of Miyazaki (Univ. of Miyazaki) |
2nd Author's Name |
Kunihito Yamamori |
2nd Author's Affiliation |
University of Miyazaki (Univ. of Miyazaki) |
3rd Author's Name |
Ikuo Yoshihara |
3rd Author's Affiliation |
University of Miyazaki (Univ. of Miyazaki) |
4th Author's Name |
Masaru Aikawa |
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University of Miyazaki (Univ. of Miyazaki) |
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Speaker |
Author-1 |
Date Time |
2006-01-12 10:00:00 |
Presentation Time |
25 minutes |
Registration for |
CAS |
Paper # |
CAS2005-75 |
Volume (vol) |
vol.105 |
Number (no) |
no.503 |
Page |
pp.1-6 |
#Pages |
6 |
Date of Issue |
2006-01-05 (CAS) |